Kernel Learning Integrative Clustering • klic

Installing

In order to install this package, you will need to have Rmosek installed.

Installing Rmosek [Unix]

Download mosek from https://www.mosek.com/downloads/ to any folder (usually /home/<username>/bin). We will refer to it as <my-mosek-directory>.
Unzip it:

cd <my-mosek-directory>
tar -xvf mosektoolslinux64x86.tar.bz2

Add the following to your ~/.bashrc file:

export PATH=$PATH:<my-mosek-directory>/mosek/8/tools/platform/linux64x86/bin

If you are eligible apply for a free personal academic license at https://www.mosek.com/products/academic-licenses/ You will receive it (immediately) via email.
Put the license file in <my-mosek-directory>/mosek
Proceed with the installation of mosek

export PKG_MOSEKHOME=<my-mosek-directory>/mosek/8/tools/platform/linux64x86
export PKG_MOSEKLIB=mosek64

Now that you have mosek installed, you can open R and install the Rmosek package with

install.packages("Rmosek", type="source", INSTALL_opts="--no-multiarch",
                  repos="http://download.mosek.com/R/8")

Installing klic

You can install the latest released version of klic from CRAN with

install.packages("klic")

or the development version from GitHub with

library(devtools)
install_github("acabassi/klic")
library(klic)